C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal modification protein rimK-like family member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177181 RIMKLA 9606 + 1:42380795-42422578 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000410070 RIMKLA-002 42380795-42410165 protein_coding
  ENST00000431473 RIMKLA-001 42380806-42422578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000410070ENST00000431473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000410070 N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00 0.116±0.00 0.705±0.00 N/A
ENST00000431473 0.191±0.00 0.097±0.00 0.243±0.00 2.613±1.48 0.147±0.11 0.655±0.05 1.481±1.05 0.335±0.28 0.127±0.12 0.257±0.00 0.048±0.04 0.056±0.02 0.139±0.07 0.689±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B0 CIL_0005B0_0002 CGP 1:42380795-42456267

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004363 IEA glutathione synthase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0006750 IEA glutathione biosynthetic process
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding
GO:0072590 ISS N-acetyl-L-aspartate-L-glutamate ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016830 rimkla ribosomal modification protein rimK-like family member A protein_coding Danio_rerio
ENSMUSG00000048899 Rimkla ribosomal modification protein rimK-like family member A protein_coding Mus_musculus

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