C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 50
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000017454 nup50 7955 + 4:60246098-60264839 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000004739 nup50-001 60246098-60264839 protein_coding
  ENSDART00000148575 nup50-002 60246182-60260864 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000004739
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000004739 12.115±12.39 10.003±0.00 7.685±0.00 6.668±0.00 6.475±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V4 CIL_0000V4_0001 CGP 4:60246098-60301556

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore
GO:0046907 IEA intracellular transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000093000 NUP50 nucleoporin 50kDa protein_coding Homo_sapiens
ENSMUSG00000016619 Nup50 nucleoporin 50 protein_coding Mus_musculus
ENSMUSG00000072878 1700123L14Rik RIKEN cDNA 1700123L14 gene protein_coding Mus_musculus

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