C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhabdoid tumor deletion region gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000017983 rtdr1 7955 + 8:46954004-46974281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000026831 rtdr1-001 46954008-46974281 protein_coding
  ENSDART00000113945 rtdr1-002 46954004-46962369 protein_coding
  ENSDART00000154026 rtdr1-201 46954024-46974279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSDART00000026831ENSDART00000113945ENSDART00000154026
Transcript ID Brain Kidney
ENSDART00000026831 0.176±0.09 0.595±0.46
ENSDART00000113945 0.371±0.24 N/A
ENSDART00000154026 0.215±0.00 0.655±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0044183 IEA protein binding involved in protein folding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100218 RTDR1 radial spoke head 14 homolog (Chlamydomonas) protein_coding Homo_sapiens
ENSMUSG00000009070 Rtdr1 radial spoke head homolog 14 (Chlamydomonas) protein_coding Mus_musculus

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