C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: radial spoke head 14 homolog (Chlamydomonas)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100218 RTDR1 9606 - 22:23059415-23145021 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216036 RTDR1-001 23059415-23142093 protein_coding
  ENST00000406876 RTDR1-002 23136198-23145021 protein_coding
  ENST00000421213 RTDR1-004 23124227-23134074 protein_coding
  ENST00000439064 RTDR1-005 23131177-23138914 protein_coding
  ENST00000452757 RTDR1-003 23135993-23140300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverLungOvaryPlacentaTestisENST00000216036ENST00000406876ENST00000439064ENST00000452757
Transcript ID Bladder Kidney Liver Lung Ovary Placenta Testis
ENST00000216036 0.319±0.00 2.365±0.00 0.081±0.00 1.333±0.00 1.080±0.00 0.243±0.00 8.803±0.87
ENST00000406876 N/A N/A N/A N/A N/A N/A 7.688±0.00
ENST00000439064 0.588±0.00 N/A N/A N/A N/A N/A N/A
ENST00000452757 N/A N/A 0.145±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SB CIL_0002SB_0001 CGP 22:23059415-23145021

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017983 rtdr1 rhabdoid tumor deletion region gene 1 protein_coding Danio_rerio
ENSMUSG00000009070 Rtdr1 radial spoke head homolog 14 (Chlamydomonas) protein_coding Mus_musculus

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