C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: radial spoke head homolog 14 (Chlamydomonas)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009070 Rtdr1 10090 - 10:74957477-75032586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009214 Rtdr1-001 74957477-75032565 protein_coding
  ENSMUST00000159761 Rtdr1-002 75024513-75032586 retained_intron
  ENSMUST00000159994 Rtdr1-004 75022304-75032528 protein_coding
  ENSMUST00000160072 Rtdr1-005 74961671-75032562 protein_coding
  ENSMUST00000160450 Rtdr1-003 74959672-75032553 protein_coding
  ENSMUST00000166088 Rtdr1-201 74957477-75032586 protein_coding
  ENSMUST00000179546 Rtdr1-202 74957477-75032553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000009214ENSMUST00000159761ENSMUST00000159994ENSMUST00000160072ENSMUST00000160450ENSMUST00000166088ENSMUST00000179546
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000009214 N/A N/A 0.094±0.00 N/A N/A 0.102±0.00 N/A N/A 0.609±0.25 1.412±1.02 0.004±0.00 9.649±0.78
ENSMUST00000159761 N/A N/A 0.075±0.02 N/A N/A 0.036±0.00 0.078±0.00 0.069±0.02 0.417±0.09 0.780±0.49 0.041±0.00 N/A
ENSMUST00000159994 0.016±0.00 N/A N/A 0.017±0.00 N/A N/A N/A 0.023±0.02 0.264±0.01 0.631±0.07 0.005±0.00 3.954±0.45
ENSMUST00000160072 N/A 0.427±0.24 0.109±0.00 N/A 0.148±0.00 N/A N/A 0.033±0.01 1.117±0.00 2.418±1.03 N/A 11.641±1.61
ENSMUST00000160450 N/A 0.231±0.04 N/A N/A N/A 0.290±0.03 N/A N/A 1.231±0.61 3.049±1.71 0.041±0.00 5.756±0.00
ENSMUST00000166088 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A 0.860±0.53 0.576±0.06 N/A 6.555±1.41
ENSMUST00000179546 N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A 0.592±0.33 3.066±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SB CIL_0002SB_0002 CGP 10:74957477-75032586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017983 rtdr1 rhabdoid tumor deletion region gene 1 protein_coding Danio_rerio
ENSG00000100218 RTDR1 radial spoke head 14 homolog (Chlamydomonas) protein_coding Homo_sapiens

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