C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vaccinia related kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018006 vrk1 7955 - 17:18604114-18627398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000045991 vrk1-001 18604114-18627398 protein_coding
  ENSDART00000152111 vrk1-002 18604114-18604647 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000045991ENSDART00000152111
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000045991 2.818±1.64 2.273±1.08 4.359±2.90 0.245±0.00 1.732±0.00
ENSDART00000152111 N/A N/A 1.610±0.21 N/A 1.502±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JE CIL_0007JE_0003 UCNEbase 17:18432902-18679929

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100749 VRK1 vaccinia related kinase 1 protein_coding Homo_sapiens
ENSMUSG00000021115 Vrk1 vaccinia related kinase 1 protein_coding Mus_musculus

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