C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6 (neurotransmitter transporter, glycine), member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018534 slc6a9 7955 + 2:33064484-33140673 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077462 slc6a9-001 33086289-33140673 protein_coding
  ENSDART00000098831 slc6a9-201 33100629-33132926 protein_coding
  ENSDART00000126135 slc6a9-202 33064484-33132926 protein_coding
  ENSDART00000137207 slc6a9-002 33100523-33117361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000077462ENSDART00000098831
Transcript ID Brain Heart Kidney Liver
ENSDART00000077462 3.945±2.57 0.580±0.04 0.497±0.02 0.022±0.00
ENSDART00000098831 N/A 0.669±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PP CIL_0001PP_0001 CGP 2:33064484-33173149

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003333 IDA amino acid transmembrane transport
GO:0005283 IEA sodium:amino acid symporter activity
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005887 IEA integral to plasma membrane
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0007626 IMP locomotory behavior
GO:0015187 IDA glycine transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015816 IDA glycine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0060080 IMP regulation of inhibitory postsynaptic membrane potential
GO:0060092 IMP regulation of synaptic transmission, glycinergic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196517 SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein_coding Homo_sapiens
ENSMUSG00000028542 Slc6a9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein_coding Mus_musculus

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