C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pbx/knotted 1 homeobox 1.1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018765 pknox1.1 7955 - 9:20337810-20357911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000125416 pknox1.1-201 20337810-20357911 protein_coding
  ENSDART00000129934 pknox1.1-202 20337810-20357911 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000125416ENSDART00000129934
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000125416 2.497±0.72 2.525±1.43 2.180±0.82 0.100±0.00 0.381±0.00
ENSDART00000129934 1.133±0.00 N/A 0.486±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000160199 PKNOX1 PBX/knotted 1 homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000006705 Pknox1 Pbx/knotted 1 homeobox protein_coding Mus_musculus

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