C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pescadillo
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018902 pes 7955 + 5:14039259-14067732 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000023101 pes-001 14039259-14067732 protein_coding
  ENSDART00000134018 pes-002 14047638-14053601 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000023101
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000023101 7.423±5.27 14.761±3.99 21.055±8.79 8.026±0.00 7.817±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F8 CIL_0006F8_0001 CGP 5:14039259-14105279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000463 ISS maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 ISS maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0005730 IEA nucleolus
GO:0006364 IEA rRNA processing
GO:0008283 ISS cell proliferation
GO:0030687 ISS preribosome, large subunit precursor
GO:0031017 IMP exocrine pancreas development
GO:0042254 IEA ribosome biogenesis
GO:0043021 IEA ribonucleoprotein complex binding
GO:0048709 IMP oligodendrocyte differentiation
GO:0051726 IMP regulation of cell cycle
GO:0070545 ISS PeBoW complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100029 PES1 pescadillo ribosomal biogenesis factor 1 protein_coding Homo_sapiens
ENSMUSG00000020430 Pes1 pescadillo homolog 1, containing BRCT domain (zebrafish) protein_coding Mus_musculus

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