C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cleavage stimulation factor, 3' pre-RNA, subunit 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018904 cstf3 7955 - 18:44148409-44175987 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025423 cstf3-001 44148409-44175987 protein_coding
  ENSDART00000052437 cstf3-201 44148414-44175931 protein_coding
  ENSDART00000149141 cstf3-003 44153090-44154408 retained_intron
  ENSDART00000149638 cstf3-002 44173122-44175966 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000025423ENSDART00000052437ENSDART00000149141ENSDART00000149638
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000025423 11.171±5.98 8.988±0.83 14.961±0.00 2.198±0.00 4.266±0.00
ENSDART00000052437 3.935±0.00 N/A 10.948±0.00 N/A N/A
ENSDART00000149141 N/A 4.085±0.18 1.580±0.00 N/A N/A
ENSDART00000149638 9.173±1.58 3.898±3.76 1.360±0.00 2.792±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000176102 CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa protein_coding Homo_sapiens
ENSMUSG00000027176 Cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 protein_coding Mus_musculus

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