C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine palmitoyltransferase, long chain base subunit 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018976 sptlc2a 7955 + 17:17634880-17686271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000123350 sptlc2a-001 17634905-17686271 protein_coding
  ENSDART00000148488 sptlc2a-003 17641640-17653754 processed_transcript
  ENSDART00000148521 sptlc2a-004 17669867-17686199 processed_transcript
  ENSDART00000149494 sptlc2a-002 17634880-17686267 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123350
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123350 5.781±0.23 6.253±2.85 31.644±0.00 0.516±0.00 1.043±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0006520 IEA cellular amino acid metabolic process
GO:0008152 IEA metabolic process
GO:0009058 IEA biosynthetic process
GO:0016740 IEA transferase activity
GO:0016829 IEA lyase activity
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100596 SPTLC2 serine palmitoyltransferase, long chain base subunit 2 protein_coding Homo_sapiens
ENSMUSG00000021036 Sptlc2 serine palmitoyltransferase, long chain base subunit 2 protein_coding Mus_musculus

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