C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019746 rfng 7955 - 12:3646187-3669142 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000002867 rfng-201 3646187-3669142 protein_coding
  ENSDART00000106665 rfng-202 3648466-3669038 protein_coding
  ENSDART00000126315 rfng-001 3650736-3669142 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000002867ENSDART00000106665ENSDART00000126315
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000002867 1.639±0.40 0.967±0.52 1.293±0.55 N/A N/A
ENSDART00000106665 1.328±0.21 0.866±0.26 0.814±0.00 0.111±0.00 0.833±0.00
ENSDART00000126315 0.312±0.04 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043X CIL_00043X_0001 CGP 12:3635055-3669142

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007389 IEA pattern specification process
GO:0016020 IEA membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030173 IEA integral to Golgi membrane
GO:0033829 IEA O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000169733 RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein_coding Homo_sapiens
ENSMUSG00000025158 Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein_coding Mus_musculus

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