C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00043X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079271-ENSDARG00000019746 CGP 7955 12:3635055-3669142
GeneTranscriptPositionBiotype
ENSDARG00000019746 (rfng)
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 		ENSDART00000002867 (rfng-201) 3646187-3669142 protein_coding
ENSDART00000106665 (rfng-202) 3648466-3669038 protein_coding
ENSDART00000126315 (rfng-001) 3650736-3669142 protein_coding
ENSDARG00000079271 (dcxr)
dicarbonyl/L-xylulose reductase 		ENSDART00000023796 (dcxr-001) 3635055-3645620 protein_coding
ENSDART00000137148 (dcxr-003) 3636857-3645629 protein_coding
ENSDART00000139721 (dcxr-002) 3641113-3645446 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00043X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169738-ENSG00000169733 CGP 9606 17:82035136-82051831
GeneTranscriptPositionBiotype
ENSG00000169727 (GPS1)
G protein pathway suppressor 1 		ENST00000306823 (GPS1-004) 82051909-82057470 protein_coding
ENST00000320548 (GPS1-003) 82051875-82057470 protein_coding
ENST00000392357 (GPS1-007) 82052570-82057470 retained_intron
ENST00000392358 (GPS1-006) 82051958-82057470 protein_coding
ENST00000578168 (GPS1-024) 82056524-82057470 protein_coding
ENST00000578279 (GPS1-023) 82054952-82057117 retained_intron
ENST00000578392 (GPS1-019) 82051908-82054542 nonsense_mediated_decay
ENST00000578552 (GPS1-001) 82051865-82057470 protein_coding
ENST00000578642 (GPS1-015) 82051898-82053785 retained_intron
ENST00000580141 (GPS1-016) 82051901-82056019 nonsense_mediated_decay
ENST00000580627 (GPS1-018) 82051902-82054682 nonsense_mediated_decay
ENST00000580716 (GPS1-010) 82051477-82054741 protein_coding
ENST00000580723 (GPS1-021) 82051927-82054738 nonsense_mediated_decay
ENST00000581418 (GPS1-017) 82051901-82054668 protein_coding
ENST00000581578 (GPS1-013) 82051897-82054542 protein_coding
ENST00000582327 (GPS1-008) 82050948-82054651 protein_coding
ENST00000583009 (GPS1-022) 82052233-82054569 protein_coding
ENST00000583486 (GPS1-025) 82056524-82057470 retained_intron
ENST00000583641 (GPS1-012) 82051897-82054757 protein_coding
ENST00000583885 (GPS1-014) 82051897-82054559 protein_coding
ENST00000583961 (GPS1-011) 82051500-82054586 protein_coding
ENST00000583983 (GPS1-026) 82050691-82051837 processed_transcript
ENST00000584229 (GPS1-020) 82051925-82053225 processed_transcript
ENST00000584460 (GPS1-005) 82051929-82057463 nonsense_mediated_decay
ENST00000585084 (GPS1-009) 82051175-82054968 protein_coding
ENST00000623691 (GPS1-028) 82051897-82057470 protein_coding
ENST00000623761 (GPS1-029) 82052242-82057424 protein_coding
ENST00000624957 (GPS1-027) 82051893-82057440 protein_coding
ENSG00000169733 (RFNG)
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 		ENST00000310496 (RFNG-001) 82047902-82051774 protein_coding
ENST00000429557 (RFNG-009) 82048553-82051434 protein_coding
ENST00000578356 (RFNG-008) 82050415-82051573 protein_coding
ENST00000578676 (RFNG-011) 82048445-82051335 retained_intron
ENST00000580793 (RFNG-006) 82047902-82050514 retained_intron
ENST00000580928 (RFNG-013) 82049793-82050759 processed_transcript
ENST00000580953 (RFNG-004) 82047906-82051562 retained_intron
ENST00000582478 (RFNG-002) 82047902-82051831 retained_intron
ENST00000583784 (RFNG-005) 82047902-82050787 retained_intron
ENST00000584463 (RFNG-010) 82050455-82051407 retained_intron
ENST00000584515 (RFNG-007) 82049907-82051586 retained_intron
ENST00000584838 (RFNG-012) 82048749-82050990 processed_transcript
ENSG00000169738 (DCXR)
dicarbonyl/L-xylulose reductase 		ENST00000306869 (DCXR-001) 82035858-82037732 protein_coding
ENST00000577286 (DCXR-019) 82035881-82036635 retained_intron
ENST00000577532 (DCXR-015) 82035136-82036995 protein_coding
ENST00000577712 (DCXR-010) 82036293-82037680 protein_coding
ENST00000577996 (DCXR-020) 82036284-82036581 processed_transcript
ENST00000578273 (DCXR-003) 82035996-82037702 retained_intron
ENST00000578885 (DCXR-008) 82035896-82037681 retained_intron
ENST00000579004 (DCXR-021) 82035879-82036412 protein_coding
ENST00000579155 (DCXR-006) 82036393-82037689 protein_coding
ENST00000579334 (DCXR-009) 82035879-82037681 retained_intron
ENST00000579821 (DCXR-018) 82036021-82036927 nonsense_mediated_decay
ENST00000579842 (DCXR-016) 82035881-82036987 retained_intron
ENST00000580320 (DCXR-004) 82035879-82037698 retained_intron
ENST00000580750 (DCXR-005) 82035881-82037697 retained_intron
ENST00000581584 (DCXR-011) 82035968-82037677 protein_coding
ENST00000582074 (DCXR-017) 82035904-82036928 retained_intron
ENST00000582613 (DCXR-013) 82036521-82037309 retained_intron
ENST00000582900 (DCXR-007) 82036018-82037687 protein_coding
ENST00000584318 (DCXR-014) 82036568-82037230 processed_transcript
ENST00000585085 (DCXR-012) 82036216-82037342 retained_intron
ENST00000585164 (DCXR-002) 82036633-82037709 retained_intron
ENSG00000264569 (RP13-650J16.1)
 ENST00000582558 (RP13-650J16.1-002) 82038031-82039246 antisense
ENST00000584705 (RP13-650J16.1-001) 82037905-82039380 antisense
ENSG00000279372 (RP11-1182P23.5)
 ENST00000623540 (RP11-1182P23.5-001) 82035403-82035800 TEC

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043X_0001ENSDARG00000019746ENSDART00000002867ENSDART00000106665ENSDART00000126315ENSDARG00000079271ENSDART00000023796ENSDART00000137148ENSDART00000139721CIL_00043X_0002ENSG00000169727ENST00000306823ENST00000320548ENST00000392357ENST00000392358ENST00000578168ENST00000578279ENST00000578392ENST00000578552ENST00000578642ENST00000580141ENST00000580627ENST00000580716ENST00000580723ENST00000581418ENST00000581578ENST00000582327ENST00000583009ENST00000583486ENST00000583641ENST00000583885ENST00000583961ENST00000583983ENST00000584229ENST00000584460ENST00000585084ENST00000623691ENST00000623761ENST00000624957ENSG00000169733ENST00000310496ENST00000429557ENST00000578356ENST00000578676ENST00000580793ENST00000580928ENST00000580953ENST00000582478ENST00000583784ENST00000584463ENST00000584515ENST00000584838ENSG00000169738ENST00000306869ENST00000577286ENST00000577532ENST00000577712ENST00000577996ENST00000578273ENST00000578885ENST00000579004ENST00000579155ENST00000579334ENST00000579821ENST00000579842ENST00000580320ENST00000580750ENST00000581584ENST00000582074ENST00000582613ENST00000582900ENST00000584318ENST00000585085ENST00000585164ENSG00000264569ENST00000582558ENST00000584705ENSG00000279372ENST00000623540
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043X_0001ENSDARG00000019746ENSDART00000002867ENSDART00000106665ENSDART00000126315ENSDARG00000079271ENSDART00000023796ENSDART00000137148ENSDART00000139721CIL_00043X_0002ENSG00000169727ENST00000306823ENST00000320548ENST00000392358ENST00000578279ENST00000578552ENST00000580141ENST00000580716ENST00000581418ENST00000583486ENST00000583641ENST00000584460ENST00000585084ENST00000623691ENST00000623761ENSG00000169733ENST00000310496ENST00000580793ENSG00000169738ENST00000306869ENST00000577286ENST00000577712ENST00000578885ENST00000579004ENST00000579334ENST00000579821ENST00000579842ENST00000580320ENST00000580750ENST00000581584ENST00000582074ENST00000582613ENST00000582900ENSG00000264569ENST00000582558ENST00000584705ENSG00000279372ENST00000623540
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019746 ENSDART00000002867 N/A N/A N/A 1.639±0.40 N/A N/A 0.967±0.52 1.293±0.55 N/A N/A N/A N/A N/A N/A
ENSDART00000106665 N/A N/A N/A 1.328±0.21 N/A N/A 0.866±0.26 0.814±0.00 0.111±0.00 N/A 0.833±0.00 N/A N/A N/A
ENSDART00000126315 N/A N/A N/A 0.312±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079271 ENSDART00000023796 N/A N/A N/A 1.101±0.38 N/A N/A 2.137±1.54 1.993±1.35 N/A N/A 1.761±0.00 N/A N/A N/A
ENSDART00000137148 N/A N/A N/A 1.216±0.05 N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139721 N/A N/A N/A N/A N/A N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169727 ENST00000306823 13.138±0.00 23.713±0.00 1.586±0.00 7.130±4.30 3.423±0.00 8.244±0.00 5.780±0.00 6.590±0.00 N/A 8.648±0.00 27.069±0.00 18.831±0.00 10.424±1.58 N/A
ENST00000320548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.310±4.58
ENST00000392357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.761±0.00 N/A N/A N/A
ENST00000578168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A
ENST00000578392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578552 18.862±0.00 14.746±0.00 N/A 6.532±3.79 28.137±0.00 10.948±0.00 7.904±6.03 36.639±0.00 13.580±10.37 14.180±0.00 32.663±25.12 21.264±8.79 23.552±9.51 35.839±0.00
ENST00000578642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580141 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.549±0.00 N/A 16.840±0.00 21.962±0.00 32.681±0.00
ENST00000580627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.562±0.00 22.224±0.00 N/A
ENST00000580723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.268±0.00 N/A N/A N/A
ENST00000581578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583486 N/A N/A N/A N/A 3.232±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.759±0.00
ENST00000583885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584460 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.780±0.00 N/A N/A N/A N/A
ENST00000585084 N/A N/A N/A N/A N/A N/A N/A N/A 3.687±0.00 N/A N/A N/A N/A N/A
ENST00000623691 N/A N/A 1.262±0.00 3.504±0.00 11.017±0.00 6.065±2.06 3.240±1.48 N/A N/A 9.995±0.00 34.255±0.00 9.708±5.49 15.097±4.91 21.452±0.00
ENST00000623761 N/A N/A N/A 7.377±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.910±0.00
ENST00000624957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169733 ENST00000310496 19.217±0.00 16.010±0.00 N/A 9.541±0.00 25.491±0.00 20.024±0.00 6.944±0.00 22.565±0.00 14.145±12.60 13.846±0.00 23.606±0.00 21.029±14.69 16.182±0.03 27.383±0.00
ENST00000429557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580793 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00 N/A 23.007±0.00 N/A N/A
ENST00000580928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169738 ENST00000306869 13.182±0.00 4.819±0.00 7.068±0.00 2.111±0.00 7.040±6.66 1.157±0.00 1.093±0.00 170.430±0.00 51.434±50.70 0.762±0.00 25.959±0.00 35.756±4.60 38.187±20.41 16.495±0.00
ENST00000577286 N/A N/A N/A 4.657±0.00 N/A N/A 3.202±0.00 79.897±0.00 N/A N/A N/A 18.259±0.00 15.007±0.00 N/A
ENST00000577532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577712 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.155±0.00 N/A 0.160±0.00 N/A N/A
ENST00000577996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578885 N/A N/A N/A N/A 0.394±0.00 0.230±0.00 N/A N/A 0.646±0.00 N/A N/A N/A N/A 7.195±0.00
ENST00000579004 N/A N/A N/A N/A N/A N/A 1.760±0.00 N/A N/A N/A N/A 0.452±0.00 N/A N/A
ENST00000579155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579334 N/A N/A 1.050±0.00 N/A N/A 5.006±0.00 15.926±0.00 N/A N/A N/A N/A N/A N/A 7.230±0.00
ENST00000579821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.009±0.00 38.080±0.00 24.854±0.00
ENST00000579842 N/A N/A N/A 1.795±0.00 N/A N/A 13.482±0.00 13.733±0.00 N/A N/A 12.804±0.00 17.313±0.00 N/A 8.961±0.00
ENST00000580320 12.915±0.00 15.420±0.00 N/A 16.986±16.11 28.012±0.00 17.311±0.00 N/A 38.074±0.00 91.874±91.66 47.834±0.00 18.122±15.34 N/A 17.787±0.00 N/A
ENST00000580750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.362±0.00 N/A N/A
ENST00000581584 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A 1.477±0.00 N/A 0.100±0.00 N/A N/A
ENST00000582074 N/A N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.00 N/A N/A
ENST00000582900 28.884±0.00 6.396±0.00 N/A 19.706±0.00 38.378±0.00 16.479±0.00 16.389±0.00 25.979±0.00 126.653±0.00 N/A 36.708±0.00 24.294±8.03 32.423±0.00 25.329±0.71
ENST00000584318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264569 ENST00000582558 0.647±0.00 0.182±0.00 N/A 1.154±0.00 0.826±0.00 0.146±0.00 N/A 2.336±1.93 3.405±0.00 N/A N/A 0.315±0.00 0.144±0.00 0.378±0.00
ENST00000584705 0.342±0.00 0.269±0.00 0.307±0.00 0.443±0.34 0.257±0.13 0.399±0.00 0.147±0.03 1.994±1.72 2.682±0.00 0.045±0.00 0.021±0.00 0.363±0.26 N/A 0.367±0.25
ENSG00000279372 ENST00000623540 N/A N/A N/A 0.349±0.11 N/A 0.306±0.13 0.043±0.00 2.150±0.00 0.215±0.00 N/A N/A 0.109±0.02 0.275±0.09 0.261±0.09

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