C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ and LIM domain 1 (elfin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019845 pdlim1 7955 - 13:25986798-25998073 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000046981 pdlim1-001 25986798-25998073 protein_coding
  ENSDART00000131792 pdlim1-003 25989364-25991100 protein_coding
  ENSDART00000145640 pdlim1-002 25993269-25997815 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000046981
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000046981 1.627±0.66 13.665±4.97 8.534±4.21 1.224±0.00 8.766±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107438 PDLIM1 PDZ and LIM domain 1 protein_coding Homo_sapiens
ENSMUSG00000055044 Pdlim1 PDZ and LIM domain 1 (elfin) protein_coding Mus_musculus

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