C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3-domain binding protein 4a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000020000 sh3bp4a 7955 + 22:14031007-14087503 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000022654 sh3bp4a-201 14031007-14086345 protein_coding
  ENSDART00000080307 sh3bp4a-202 14031007-14086686 protein_coding
  ENSDART00000105711 sh3bp4a-001 14031007-14086690 protein_coding
  ENSDART00000130585 sh3bp4a-203 14062333-14087503 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000105711ENSDART00000130585
Transcript ID Brain Heart Kidney Muscle
ENSDART00000105711 0.938±0.00 0.710±0.00 0.465±0.00 N/A
ENSDART00000130585 1.348±0.75 0.370±0.19 0.700±0.15 0.946±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005092 ISS GDP-dissociation inhibitor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005905 IEA coated pit
GO:0006897 IEA endocytosis
GO:0008285 ISS negative regulation of cell proliferation
GO:0010508 ISS positive regulation of autophagy
GO:0016020 IEA membrane
GO:0030136 IEA clathrin-coated vesicle
GO:0030308 ISS negative regulation of cell growth
GO:0031410 IEA cytoplasmic vesicle
GO:0032007 ISS negative regulation of TOR signaling
GO:0034260 ISS negative regulation of GTPase activity
GO:0061462 ISS protein localization to lysosome
GO:0071230 ISS cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130147 SH3BP4 SH3-domain binding protein 4 protein_coding Homo_sapiens
ENSMUSG00000036206 Sh3bp4 SH3-domain binding protein 4 protein_coding Mus_musculus

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