C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 7, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000023542 cdh7 7955 + 2:27158585-27242858 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000030547 cdh7-001 27158609-27242823 protein_coding
  ENSDART00000099165 cdh7-002 27193340-27197736 retained_intron
  ENSDART00000122029 cdh7-201 27158585-27242858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000030547ENSDART00000099165
Transcript ID Heart Kidney Liver Muscle
ENSDART00000030547 0.043±0.00 0.049±0.00 0.015±0.00 0.212±0.00
ENSDART00000099165 0.127±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030903 IMP notochord development
GO:0060034 IMP notochord cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000081138 CDH7 cadherin 7, type 2 protein_coding Homo_sapiens
ENSMUSG00000026312 Cdh7 cadherin 7, type 2 protein_coding Mus_musculus

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