C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptojanin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000025011 synj1 7955 + 10:27150376-27203780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000042829 synj1-201 27151660-27200793 protein_coding
  ENSDART00000134276 synj1-001 27150376-27203780 protein_coding
  ENSDART00000139056 synj1-002 27166307-27173067 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000134276
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000134276 34.714±6.27 3.839±1.52 1.237±0.69 0.133±0.00 1.122±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0007268 IMP synaptic transmission
GO:0009584 IMP detection of visible light
GO:0016311 IDA dephosphorylation
GO:0034595 IDA phosphatidylinositol phosphate 5-phosphatase activity
GO:0034596 IDA phosphatidylinositol phosphate 4-phosphatase activity
GO:0042578 IEA phosphoric ester hydrolase activity
GO:0046549 IMP retinal cone cell development
GO:0046856 IEA phosphatidylinositol dephosphorylation
GO:0050808 IMP synapse organization
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000159082 SYNJ1 synaptojanin 1 protein_coding Homo_sapiens
ENSMUSG00000022973 Synj1 synaptojanin 1 protein_coding Mus_musculus

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