C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: posterior neuron-specific homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000025899 pnx 7955 + 10:2826477-2829049 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000030709 pnx-001 2826477-2829049 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000030709
Transcript ID Heart Kidney
ENSDART00000030709 0.057±0.00 1.238±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000229544 NKX1-2 NK1 homeobox 2 protein_coding Homo_sapiens
ENSG00000235608 NKX1-1 NK1 homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000029112 Nkx1-1 NK1 transcription factor related, locus 1 (Drosophila) protein_coding Mus_musculus
ENSMUSG00000048528 Nkx1-2 NK1 transcription factor related, locus 2 (Drosophila) protein_coding Mus_musculus

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