C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NK1 homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000235608 NKX1-1 9606 - 4:1402932-1406331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000422806 NKX1-1-001 1402932-1406331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000422806
Transcript ID Testis
ENST00000422806 1.339±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0001 VISTA 4:1311752-1912379
CIL_0006LY CIL_0006LY_0001 CGP 4:1402932-1684302

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006629 IEA lipid metabolic process
GO:0008150 ND biological_process
GO:0010906 IEA regulation of glucose metabolic process
GO:0043467 IEA regulation of generation of precursor metabolites and energy
GO:0043565 IEA sequence-specific DNA binding
GO:0050877 IEA neurological system process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006350 nkx1.2la NK1 transcription factor related 2-like,a protein_coding Danio_rerio
ENSDARG00000025899 pnx posterior neuron-specific homeobox protein_coding Danio_rerio
ENSMUSG00000029112 Nkx1-1 NK1 transcription factor related, locus 1 (Drosophila) protein_coding Mus_musculus

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