C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NK1 transcription factor related, locus 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029112 Nkx1-1 10090 - 5:33430734-33433976 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000173348 Nkx1-1-001 33430734-33433976 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000173348
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000173348 0.949±0.07 0.018±0.00 0.028±0.00 0.008±0.00 0.039±0.01 0.282±0.23 0.232±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006LY CIL_0006LY_0002 CGP 5:33430734-33629635

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006629 IMP lipid metabolic process
GO:0010906 IMP regulation of glucose metabolic process
GO:0043467 IMP regulation of generation of precursor metabolites and energy
GO:0043565 IEA sequence-specific DNA binding
GO:0050877 IMP neurological system process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006350 nkx1.2la NK1 transcription factor related 2-like,a protein_coding Danio_rerio
ENSDARG00000025899 pnx posterior neuron-specific homeobox protein_coding Danio_rerio
ENSG00000235608 NKX1-1 NK1 homeobox 1 protein_coding Homo_sapiens

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