C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: iron-sulfur cluster scaffold homolog (E. coli) b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000026582 iscub 7955 + 5:33497658-33506462 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000036235 iscub-001 33497658-33506462 protein_coding
  ENSDART00000140541 iscub-004 33497668-33506165 protein_coding
  ENSDART00000142425 iscub-003 33497686-33506243 nonsense_mediated_decay
  ENSDART00000146336 iscub-002 33505133-33505984 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000036235ENSDART00000142425
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000036235 60.650±8.10 170.845±86.51 37.358±11.63 1.269±0.00 18.902±0.00
ENSDART00000142425 15.390±0.00 47.299±0.00 4.150±0.00 2.966±0.00 9.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IZ CIL_0007IZ_0001 CGP 5:33497658-33513260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0016226 IEA iron-sulfur cluster assembly
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000136003 ISCU iron-sulfur cluster assembly enzyme protein_coding Homo_sapiens
ENSMUSG00000025825 Iscu IscU iron-sulfur cluster scaffold homolog (E. coli) protein_coding Mus_musculus

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