C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exostoses (multiple)-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000039499 extl3-201 ENSDARG00000026811 7955 - 20:50252671-50273850 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000039499
Transcript ID Brain Heart Liver Muscle
ENSDART00000039499 3.510±0.00 0.822±0.00 0.365±0.00 0.356±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RT CIL_0000RT_0001 CGP 20:50206973-50326789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001888 ISS glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral to membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0030516 IMP regulation of axon extension
GO:0031227 IEA intrinsic to endoplasmic reticulum membrane
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0033339 IMP pectoral fin development
GO:0033564 IGI anterior/posterior axon guidance
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0035138 IMP pectoral fin morphogenesis
GO:0045743 IMP positive regulation of fibroblast growth factor receptor signaling pathway
GO:0050650 IMP chondroitin sulfate proteoglycan biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022550 Extl3-201 protein_coding Mus_musculus 0 878

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