C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000027041 pcdh17 7955 - 11:33389437-33536991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000125630 pcdh17-201 33389437-33535501 protein_coding
  ENSDART00000155592 pcdh17-001 33390694-33536991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000125630ENSDART00000155592
Transcript ID Brain Heart Liver Muscle
ENSDART00000125630 7.017±1.46 0.240±0.03 N/A 0.557±0.00
ENSDART00000155592 N/A N/A 0.068±0.00 0.293±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0060041 IMP retina development in camera-type eye
GO:0060219 IMP camera-type eye photoreceptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000118946 PCDH17 protocadherin 17 protein_coding Homo_sapiens
ENSMUSG00000035566 Pcdh17 protocadherin 17 protein_coding Mus_musculus

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