C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intraflagellar transport 88 homolog
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000027234 ift88 7955 - 9:22398978-22416834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000038923 ift88-001 22398978-22416834 protein_coding
  ENSDART00000110943 ift88-201 22399251-22415535 protein_coding
  ENSDART00000132032 ift88-002 22398978-22403110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000038923ENSDART00000110943ENSDART00000132032
Transcript ID Brain Heart Kidney Liver
ENSDART00000038923 4.371±0.00 0.675±0.00 1.476±1.30 0.094±0.00
ENSDART00000110943 N/A 0.820±0.59 N/A 0.043±0.00
ENSDART00000132032 N/A 1.494±1.08 4.113±0.29 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000132 IMP establishment of mitotic spindle orientation
GO:0001539 IMP ciliary or bacterial-type flagellar motility
GO:0005515 IEA protein binding
GO:0005622 IMP intracellular
GO:0005929 IDA cilium
GO:0005930 IDA axoneme
GO:0005932 IDA microtubule basal body
GO:0007368 IGI determination of left/right symmetry
GO:0007369 IMP gastrulation
GO:0035058 IMP nonmotile primary cilium assembly
GO:0042073 IMP intraciliary transport
GO:0042384 IMP cilium assembly
GO:0042462 IMP eye photoreceptor cell development
GO:0042995 IEA cell projection
GO:0045494 IMP photoreceptor cell maintenance
GO:0045880 IMP positive regulation of smoothened signaling pathway
GO:0060271 IMP cilium morphogenesis
GO:0060785 IMP regulation of apoptosis involved in tissue homeostasis
GO:0071482 IMP cellular response to light stimulus
GO:0072019 IMP proximal convoluted tubule development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000032742 IFT88 intraflagellar transport 88 protein_coding Homo_sapiens
ENSMUSG00000040040 Ift88 intraflagellar transport 88 protein_coding Mus_musculus

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