C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TruB pseudouridine (psi) synthase homolog 2 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000028379 trub2 7955 - 6:40954444-40959562 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000134293 trub2-001 40954444-40959562 protein_coding
  ENSDART00000151101 trub2-002 40957092-40959482 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000134293ENSDART00000151101
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000134293 5.240±1.97 5.734±4.44 5.705±4.70 1.587±0.00 4.435±0.00
ENSDART00000151101 2.407±0.00 N/A 1.904±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0006396 IEA RNA processing
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167112 TRUB2 TruB pseudouridine (psi) synthase family member 2 protein_coding Homo_sapiens
ENSMUSG00000039826 Trub2 TruB pseudouridine (psi) synthase homolog 2 (E. coli) protein_coding Mus_musculus

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