C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type V, alpha 3b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000028524 col5a3b 7955 - 1:60230505-60263365 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000014072 col5a3b-201 60230505-60263234 protein_coding
  ENSDART00000152710 col5a3b-001 60235951-60263365 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000014072ENSDART00000152710
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000014072 0.161±0.08 0.076±0.00 0.033±0.00 0.005±0.00 0.034±0.00
ENSDART00000152710 0.091±0.00 0.023±0.00 0.852±0.74 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077H CIL_00077H_0001 CGP 1:60230505-60279318

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000080573 COL5A3 collagen, type V, alpha 3 protein_coding Homo_sapiens
ENSMUSG00000004098 Col5a3 collagen, type V, alpha 3 protein_coding Mus_musculus

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