C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029168 ppfibp2b 7955 + 25:16296331-16400279 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000089035 ppfibp2b-201 16318413-16400279 protein_coding
  ENSDART00000126641 ppfibp2b-001 16296331-16360341 protein_coding
  ENSDART00000140047 ppfibp2b-003 16355013-16364781 protein_coding
  ENSDART00000144723 ppfibp2b-002 16351156-16395533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000126641ENSDART00000144723
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000126641 N/A N/A 0.908±0.00 N/A N/A
ENSDART00000144723 2.823±0.69 3.481±2.08 1.433±0.00 0.334±0.00 0.941±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D4 CIL_0000D4_0001 CGP 25:16290804-16400279
CIL_0000DI CIL_0000DI_0001 CGP 25:16296331-16414595

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008907 IEA integrase activity
GO:0015074 IEA DNA integration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166387 PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2) protein_coding Homo_sapiens
ENSMUSG00000036528 Ppfibp2 PTPRF interacting protein, binding protein 2 (liprin beta 2) protein_coding Mus_musculus

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