C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PTPRF interacting protein, binding protein 2 (liprin beta 2)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036528 Ppfibp2 10090 + 7:107595051-107748582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040056 Ppfibp2-201 107595051-107744894 protein_coding
  ENSMUST00000098134 Ppfibp2-202 107606844-107748582 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040056ENSMUST00000098134
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040056 2.178±1.02 24.913±6.50 1.806±0.00 3.371±2.25 2.522±0.00 1.614±0.36 4.282±0.74 3.612±1.12 N/A 0.897±0.03 2.019±1.29 22.782±18.07 3.234±0.50
ENSMUST00000098134 0.943±0.00 4.427±0.00 N/A 0.935±0.00 0.665±0.00 5.388±0.75 N/A N/A 1.500±0.00 1.859±0.15 1.169±0.16 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D4 CIL_0000D4_0003 CGP 7:107567446-107748582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005615 IEA extracellular space
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008907 IEA integrase activity
GO:0015074 IEA DNA integration
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029168 ppfibp2b protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2b protein_coding Danio_rerio
ENSDARG00000061977 ppfibp2a protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2a protein_coding Danio_rerio
ENSG00000166387 PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2) protein_coding Homo_sapiens

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