C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: low density lipoprotein receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029476 ldlr 7955 + 3:19121207-19145587 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000046297 ldlr-201 19121207-19143302 protein_coding
  ENSDART00000146955 ldlr-001 19121207-19145587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000046297ENSDART00000146955
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000046297 0.180±0.00 0.261±0.19 N/A N/A N/A
ENSDART00000146955 0.491±0.38 2.323±1.65 24.880±9.96 17.494±0.00 1.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058P CIL_00058P_0002 CGP 3:19067702-19145587

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130164 LDLR low density lipoprotein receptor protein_coding Homo_sapiens
ENSMUSG00000032193 Ldlr low density lipoprotein receptor protein_coding Mus_musculus

Loading