C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: high-mobility group box 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029722 hmgb2a 7955 - 1:38578878-38581153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000047159 hmgb2a-001 38578878-38581153 protein_coding
  ENSDART00000137451 hmgb2a-004 38579182-38581014 protein_coding
  ENSDART00000142060 hmgb2a-002 38580050-38581018 retained_intron
  ENSDART00000142811 hmgb2a-003 38579800-38580363 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000047159ENSDART00000137451
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000047159 44.205±24.61 425.429±233.94 669.326±249.76 4.281±0.00 42.227±0.00
ENSDART00000137451 N/A N/A N/A N/A 8.913±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007Y CIL_00007Y_0001 CGP 1:38161657-38580268
CIL_00007T CIL_00007T_0001 CGP 1:38552081-38581153

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164104 HMGB2 high mobility group box 2 protein_coding Homo_sapiens
ENSMUSG00000054717 Hmgb2 high mobility group box 2 protein_coding Mus_musculus

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