C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cancer susceptibility candidate 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029911 casc3 7955 - 3:23720194-23753195 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000040065 casc3-001 23720194-23753195 protein_coding
  ENSDART00000153732 casc3-002 23721486-23726242 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000040065
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000040065 15.805±3.77 5.773±0.65 7.363±0.00 3.277±0.00 4.291±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0006810 IEA transport
GO:0008380 IEA RNA splicing
GO:0016607 IEA nuclear speck
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000108349 CASC3 cancer susceptibility candidate 3 protein_coding Homo_sapiens
ENSMUSG00000078676 Casc3 cancer susceptibility candidate 3 protein_coding Mus_musculus

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