C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syndecan binding protein (syntenin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030097 sdcbp 7955 - 7:59500118-59514763 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000050077 sdcbp-001 59504406-59514763 protein_coding
  ENSDART00000123573 sdcbp-201 59500118-59514166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000050077ENSDART00000123573
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000050077 8.445±2.77 0.069±0.00 0.436±0.00 0.254±0.00 0.603±0.00
ENSDART00000123573 10.488±6.14 0.075±0.05 0.262±0.06 0.027±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0045545 IDA syndecan binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137575 SDCBP syndecan binding protein (syntenin) protein_coding Homo_sapiens
ENSMUSG00000028249 Sdcbp syndecan binding protein protein_coding Mus_musculus

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