C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spectrin repeat containing, nuclear envelope 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030107 syne2a 7955 - 20:21710557-21878330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027454 syne2a-201 21711143-21868333 protein_coding
  ENSDART00000133286 syne2a-002 21711672-21745130 protein_coding
  ENSDART00000145807 syne2a-003 21859602-21878219 protein_coding
  ENSDART00000152145 syne2a-004 21745134-21878330 protein_coding
  ENSDART00000152768 syne2a-001 21710557-21878330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000027454ENSDART00000133286ENSDART00000152768
Transcript ID Brain Heart Liver Muscle
ENSDART00000027454 N/A 0.040±0.00 N/A N/A
ENSDART00000133286 0.586±0.16 0.838±0.00 0.049±0.00 4.429±0.00
ENSDART00000152768 0.051±0.01 0.060±0.02 N/A 0.299±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0009190 IEA cyclic nucleotide biosynthetic process
GO:0016021 IEA integral to membrane
GO:0016849 IEA phosphorus-oxygen lyase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000054654 SYNE2 spectrin repeat containing, nuclear envelope 2 protein_coding Homo_sapiens
ENSMUSG00000063450 Syne2 spectrin repeat containing, nuclear envelope 2 protein_coding Mus_musculus

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