C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY-box containing gene 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030125 sox7 7955 + 20:19138756-19150584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000044224 sox7-201 19147287-19150579 protein_coding
  ENSDART00000130271 sox7-001 19138756-19150584 protein_coding
  ENSDART00000152827 sox7-202 19139018-19150311 protein_coding

Danio rerio EnsemblZv9

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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000044224ENSDART00000152827
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000044224 6.022±2.21 8.141±4.44 1.959±0.29 N/A 9.363±0.00
ENSDART00000152827 1.138±0.09 2.421±0.28 5.506±1.16 0.090±0.00 1.324±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q1 CIL_0006Q1_0001 CGP 20:19078863-19150584

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001570 IGI vasculogenesis
GO:0048793 IEA pronephros development
GO:0060840 IGI artery development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171056 SOX7 SRY (sex determining region Y)-box 7 protein_coding Homo_sapiens
ENSG00000258724 SOX7 protein_coding Homo_sapiens
ENSMUSG00000063060 Sox7 SRY (sex determining region Y)-box 7 protein_coding Mus_musculus

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