C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY-box containing gene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000152827 sox7-202 ENSDARG00000030125 7955 + 20:19139018-19150311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000152827
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000152827 1.138±0.09 2.421±0.28 5.506±1.16 0.090±0.00 1.324±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q1 CIL_0006Q1_0001 CGP 20:19078863-19150584

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IGI vasculogenesis
GO:0048793 IEA pronephros development
GO:0060840 IGI artery development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000579 Sox9-001 protein_coding Mus_musculus 1e-18 100
ENST00000272193 SOX13-004 processed_transcript Homo_sapiens 0.00000000002 75
ENST00000367204 SOX13-002 protein_coding Homo_sapiens 0.00000000005 75
ENST00000618875 SOX13-201 protein_coding Homo_sapiens 0.00000000005 75

Loading