C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine palmitoyltransferase, long chain base subunit 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030743 sptlc3 7955 - 13:35025204-35083413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000047552 sptlc3-201 35025204-35079461 protein_coding
  ENSDART00000134573 sptlc3-001 35075882-35083413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000047552ENSDART00000134573
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000047552 0.187±0.13 0.496±0.22 4.552±4.98 1.109±0.00 1.377±0.00
ENSDART00000134573 0.047±0.01 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0006520 IEA cellular amino acid metabolic process
GO:0009058 IEA biosynthetic process
GO:0016829 IEA lyase activity
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172296 SPTLC3 serine palmitoyltransferase, long chain base subunit 3 protein_coding Homo_sapiens
ENSMUSG00000039092 Sptlc3 serine palmitoyltransferase, long chain base subunit 3 protein_coding Mus_musculus

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