C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: finTRIM family, member 56
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030954 ftr56 7955 - 19:13020670-13026716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000103703 ftr56-001 13020679-13026716 protein_coding
  ENSDART00000151586 ftr56-002 13020670-13026442 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103703ENSDART00000151586
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103703 0.161±0.00 2.090±1.31 2.188±0.00 N/A N/A
ENSDART00000151586 0.372±0.21 0.708±0.09 0.300±0.00 0.027±0.00 0.078±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132481 TRIM47 tripartite motif containing 47 protein_coding Homo_sapiens
ENSMUSG00000020773 Trim47 tripartite motif-containing 47 protein_coding Mus_musculus

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