C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030976 vipas39 7955 - 20:18418265-18454254 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000041451 vipas39-001 18418268-18454254 protein_coding
  ENSDART00000135539 vipas39-002 18418265-18453896 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000041451
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000041451 9.196±3.51 1.217±0.97 3.894±0.00 0.241±0.00 1.026±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0005768 IEA endosome
GO:0005769 IEA early endosome
GO:0005770 IEA late endosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006810 IEA transport
GO:0007283 IEA spermatogenesis
GO:0015031 IEA protein transport
GO:0016023 IEA cytoplasmic membrane-bounded vesicle
GO:0030154 IEA cell differentiation
GO:0031410 IEA cytoplasmic vesicle
GO:0055037 IEA recycling endosome
GO:0061008 IMP hepaticobiliary system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000151445 VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog protein_coding Homo_sapiens
ENSMUSG00000021038 Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog protein_coding Mus_musculus

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