C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM homeobox 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000031222 lhx2b 7955 + 8:3251922-3268194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000136250 lhx2b-002 3252021-3255669 protein_coding
  ENSDART00000148020 lhx2b-001 3251922-3268194 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENSDART00000148020
Transcript ID Heart Muscle
ENSDART00000148020 0.028±0.00 0.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MV CIL_0007MV_0003 UCNEbase 8:3122708-3493349

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007411 IMP axon guidance
GO:0007420 IMP brain development
GO:0007634 IMP optokinetic behavior
GO:0008270 IEA zinc ion binding
GO:0009416 IMP response to light stimulus
GO:0010468 IMP regulation of gene expression
GO:0021537 IMP telencephalon development
GO:0021554 IMP optic nerve development
GO:0021794 IGI thalamus development
GO:0030900 IMP forebrain development
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0043010 IMP camera-type eye development
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0071632 IMP optomotor response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000106689 LHX2 LIM homeobox 2 protein_coding Homo_sapiens
ENSMUSG00000000247 Lhx2 LIM homeobox protein 2 protein_coding Mus_musculus

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