C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily A, member 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000031875 trpa1b 7955 + 24:13539520-13618241 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105997 trpa1b-001 13539520-13618241 protein_coding
  ENSDART00000126769 trpa1b-002 13546259-13617587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000105997ENSDART00000126769
Transcript ID Brain Heart Kidney Muscle
ENSDART00000105997 0.059±0.05 N/A 0.050±0.01 N/A
ENSDART00000126769 0.198±0.09 0.033±0.00 0.035±0.00 0.040±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0008381 ISS mechanically-gated ion channel activity
GO:0015276 IDA ligand-gated ion channel activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034220 IDA ion transmembrane transport
GO:0050907 IDA detection of chemical stimulus involved in sensory perception
GO:0050968 IGI detection of chemical stimulus involved in sensory perception of pain
GO:0050974 ISS detection of mechanical stimulus involved in sensory perception
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000104321 TRPA1 transient receptor potential cation channel, subfamily A, member 1 protein_coding Homo_sapiens
ENSMUSG00000032769 Trpa1 transient receptor potential cation channel, subfamily A, member 1 protein_coding Mus_musculus

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