C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypyrimidine tract binding protein 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000031907 ptbp1b 7955 + 11:14562158-14583552 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000039822 ptbp1b-001 14562158-14583552 protein_coding
  ENSDART00000132997 ptbp1b-003 14562239-14568150 nonsense_mediated_decay
  ENSDART00000137347 ptbp1b-002 14562200-14569371 protein_coding
  ENSDART00000146737 ptbp1b-004 14575288-14579724 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000039822
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000039822 1.897±0.21 7.075±3.86 17.991±8.51 0.797±0.00 2.199±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000011304 PTBP1 polypyrimidine tract binding protein 1 protein_coding Homo_sapiens
ENSMUSG00000006498 Ptbp1 polypyrimidine tract binding protein 1 protein_coding Mus_musculus

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