C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alpha-tropomyosin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000033683 tpma 7955 + 7:31288757-31297120 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000039657 tpma-201 31288757-31297120 protein_coding
  ENSDART00000054763 tpma-202 31291304-31297120 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000039657ENSDART00000054763
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000039657 6.241±0.00 0.587±0.00 27.289±0.00 1.541±0.00 3852.550±0.00
ENSDART00000054763 6.274±4.03 1.065±0.00 29.770±21.04 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000502 CIL_000502_0001 CGP 7:31200056-31297120

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000140416 TPM1 tropomyosin 1 (alpha) protein_coding Homo_sapiens

Loading