C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: estrogen receptor 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034181 esr2b 7955 + 13:37419899-37469856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000041300 esr2b-002 37419930-37469642 protein_coding
  ENSDART00000063412 esr2b-201 37438087-37469854 protein_coding
  ENSDART00000131800 esr2b-001 37419899-37469856 protein_coding
  ENSDART00000141570 esr2b-004 37462446-37464787 retained_intron
  ENSDART00000147196 esr2b-003 37452868-37460632 retained_intron

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000041300ENSDART00000063412ENSDART00000131800
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000041300 1.413±0.00 0.459±0.00 3.464±0.79 2.861±0.00 1.195±0.00
ENSDART00000063412 0.318±0.15 1.851±1.70 5.517±2.16 7.153±0.00 0.475±0.00
ENSDART00000131800 1.635±0.00 0.126±0.02 N/A 9.985±0.00 1.333±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0030284 IEA estrogen receptor activity
GO:0030520 IEA intracellular estrogen receptor signaling pathway
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000140009 ESR2 estrogen receptor 2 (ER beta) protein_coding Homo_sapiens
ENSMUSG00000021055 Esr2 estrogen receptor 2 (beta) protein_coding Mus_musculus

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