C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cholinergic receptor, nicotinic, epsilon
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034307 chrne 7955 - 5:40040556-40051539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112487 chrne-201 40040566-40051539 protein_coding
  ENSDART00000136428 chrne-001 40040556-40051539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112487ENSDART00000136428
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112487 N/A 1.571±0.26 0.134±0.03 N/A N/A
ENSDART00000136428 0.312±0.17 1.834±0.89 0.681±0.34 0.046±0.00 30.254±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005216 IEA ion channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0005892 IDA acetylcholine-gated channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0007271 IDA synaptic transmission, cholinergic
GO:0015464 IDA acetylcholine receptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000108556 CHRNE cholinergic receptor, nicotinic, epsilon (muscle) protein_coding Homo_sapiens
ENSMUSG00000014609 Chrne cholinergic receptor, nicotinic, epsilon polypeptide protein_coding Mus_musculus

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