C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XXVII, alpha 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034373 col27a1a 7955 + 16:55373410-55517762 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000057304 col27a1a-201 55373410-55517762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000057304
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000057304 0.082±0.03 0.378±0.18 0.167±0.00 0.043±0.00 0.275±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196739 COL27A1 collagen, type XXVII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000045672 Col27a1 collagen, type XXVII, alpha 1 protein_coding Mus_musculus

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