C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sodium channel, voltage-gated, type IV, alpha, b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034588 scn4ab 7955 + 3:22486138-22529879 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000044157 scn4ab-001 22486184-22529879 protein_coding
  ENSDART00000104004 scn4ab-201 22486138-22528070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000044157ENSDART00000104004
Transcript ID Brain Heart Kidney Muscle
ENSDART00000044157 0.150±0.08 3.251±1.34 2.604±1.10 21.174±0.00
ENSDART00000104004 0.085±0.00 1.009±0.00 1.480±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005248 IEA voltage-gated sodium channel activity
GO:0005272 IEA sodium channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006814 IEA sodium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000007314 SCN4A sodium channel, voltage-gated, type IV, alpha subunit protein_coding Homo_sapiens
ENSMUSG00000001027 Scn4a sodium channel, voltage-gated, type IV, alpha protein_coding Mus_musculus

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