C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoic acid receptor, alpha b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034893 rarab 7955 - 3:33201407-33396597 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000044677 rarab-001 33202980-33250855 protein_coding
  ENSDART00000126022 rarab-201 33201407-33312201 protein_coding
  ENSDART00000151070 rarab-003 33221155-33396597 processed_transcript
  ENSDART00000151554 rarab-002 33220964-33250659 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000044677ENSDART00000126022ENSDART00000151070ENSDART00000151554
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000044677 N/A N/A 2.869±0.99 0.286±0.00 0.215±0.00
ENSDART00000126022 3.858±2.16 1.395±0.69 1.488±0.31 0.290±0.00 0.350±0.00
ENSDART00000151070 N/A N/A N/A N/A 0.421±0.00
ENSDART00000151554 N/A N/A N/A 2.166±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IMP liver development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003708 IEA retinoic acid receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0033339 IDA pectoral fin development
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0048384 IEA retinoic acid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131759 RARA retinoic acid receptor, alpha protein_coding Homo_sapiens
ENSMUSG00000037992 Rara retinoic acid receptor, alpha protein_coding Mus_musculus

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