C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoic acid receptor, alpha b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000126022 rarab-201 ENSDARG00000034893 7955 - 3:33201407-33312201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000126022
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000126022 3.858±2.16 1.395±0.69 1.488±0.31 0.290±0.00 0.350±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254066 RARA-001 protein_coding Homo_sapiens 0 863
ENST00000394081 RARA-004 protein_coding Homo_sapiens 0 835
ENST00000394086 RARA-003 protein_coding Homo_sapiens 0 835
ENST00000394089 RARA-002 protein_coding Homo_sapiens 0 863
ENST00000475125 RARA-005 protein_coding Homo_sapiens 0 582
ENST00000617726 RARA-201 protein_coding Homo_sapiens 0 815

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