C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: X-box binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000035622 xbp1 7955 - 5:17718234-17722743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000051649 xbp1-201 17718235-17722691 protein_coding
  ENSDART00000124002 xbp1-002 17718234-17722656 processed_transcript
  ENSDART00000124467 xbp1-001 17718234-17722743 protein_coding
  ENSDART00000139390 xbp1-003 17720041-17722691 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051649ENSDART00000124002ENSDART00000124467
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051649 27.434±8.14 27.555±25.16 105.278±58.83 34.571±0.00 22.390±0.00
ENSDART00000124002 N/A 0.448±0.00 N/A N/A N/A
ENSDART00000124467 54.054±23.72 78.360±30.96 35.794±0.00 44.843±0.00 27.841±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TU CIL_0004TU_0001 CGP 5:17718234-17907478

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0035188 IMP hatching
GO:0043565 IEA sequence-specific DNA binding
GO:0048785 IMP hatching gland development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100219 XBP1 X-box binding protein 1 protein_coding Homo_sapiens
ENSMUSG00000020484 Xbp1 X-box binding protein 1 protein_coding Mus_musculus

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