C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004TU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035622-ENSDARG00000062573 CGP 7955 5:17718234-17907478
GeneTranscriptPositionBiotype
ENSDARG00000035622 (xbp1)
X-box binding protein 1
ENSDART00000051649 (xbp1-201) 17718235-17722691 protein_coding
ENSDART00000124002 (xbp1-002) 17718234-17722656 processed_transcript
ENSDART00000124467 (xbp1-001) 17718234-17722743 protein_coding
ENSDART00000139390 (xbp1-003) 17720041-17722691 retained_intron
ENSDARG00000062573 (znrf3)
zinc and ring finger 3
ENSDART00000090657 (znrf3-001) 17898786-17907478 protein_coding
ENSDART00000153816 (znrf3-201) 17898786-17907247 protein_coding
CIL_0004TU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100219-ENSG00000183579 CGP 9606 22:28794555-29057487
GeneTranscriptPositionBiotype
ENSG00000100219 (XBP1)
X-box binding protein 1
ENST00000216037 (XBP1-001) 28794555-28800597 protein_coding
ENST00000344347 (XBP1-007) 28795175-28800524 protein_coding
ENST00000403532 (XBP1-006) 28794557-28800558 protein_coding
ENST00000405219 (XBP1-003) 28794589-28800133 protein_coding
ENST00000482720 (XBP1-005) 28798906-28800569 retained_intron
ENST00000484256 (XBP1-004) 28794559-28797045 retained_intron
ENST00000611155 (XBP1-201) 28794560-28800572 protein_coding
ENSG00000224256 (CTA-292E10.7)
ENST00000447099 (CTA-292E10.7-001) 28835893-28836137 processed_pseudogene
ENSG00000272858 (CTA-292E10.8)
ENST00000607919 (CTA-292E10.8-001) 28814914-28815662 sense_intronic
ENSG00000279978 (chr22-38_28785274-29006793.1)
ENST00000623644 (chr22-38_28785274-29006793.1-001) 28930201-29197572 lincRNA
ENSG00000280111 (CTA-292E10.9)
ENST00000623127 (CTA-292E10.9-001) 28784360-28809287 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TU_0001ENSDARG00000035622ENSDART00000051649ENSDART00000124002ENSDART00000124467ENSDART00000139390ENSDARG00000062573ENSDART00000090657ENSDART00000153816CIL_0004TU_0002ENSG00000100219ENST00000216037ENST00000344347ENST00000403532ENST00000405219ENST00000482720ENST00000484256ENST00000611155ENSG00000224256ENST00000447099ENSG00000272858ENST00000607919ENSG00000279978ENST00000623644ENSG00000280111ENST00000623127
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TU_0001ENSDARG00000035622ENSDART00000051649ENSDART00000124002ENSDART00000124467ENSDARG00000062573ENSDART00000090657ENSDART00000153816CIL_0004TU_0002ENSG00000100219ENST00000216037ENST00000344347ENST00000482720ENST00000611155ENSG00000224256ENST00000447099ENSG00000272858ENST00000607919ENSG00000279978ENST00000623644ENSG00000280111ENST00000623127
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035622 ENSDART00000051649 N/A N/A N/A 27.434±8.14 N/A N/A 27.555±25.16 105.278±58.83 34.571±0.00 N/A 22.390±0.00 N/A N/A N/A
ENSDART00000124002 N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000124467 N/A N/A N/A 54.054±23.72 N/A N/A 78.360±30.96 35.794±0.00 44.843±0.00 N/A 27.841±0.00 N/A N/A N/A
ENSDART00000139390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062573 ENSDART00000090657 N/A N/A N/A 1.510±0.00 N/A N/A 0.758±0.10 0.811±0.00 0.217±0.00 N/A 0.720±0.00 N/A N/A N/A
ENSDART00000153816 N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100219 ENST00000216037 28.746±0.00 84.634±0.00 1.968±0.00 8.725±5.13 51.226±18.38 30.480±17.82 15.407±11.55 96.211±34.85 130.748±126.70 46.432±35.70 49.434±0.00 42.825±28.02 27.618±6.91 28.592±0.00
ENST00000344347 N/A N/A N/A N/A 20.740±0.00 9.302±0.00 17.922±0.00 33.065±0.00 N/A 75.328±0.00 N/A 55.889±46.76 54.280±29.04 N/A
ENST00000403532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482720 N/A N/A 7.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 57.333±0.00 N/A
ENST00000484256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611155 N/A N/A N/A N/A N/A N/A 1.948±0.00 N/A 4.671±0.00 14.745±0.00 3.395±0.00 23.664±0.00 34.401±20.26 N/A
ENSG00000224256 ENST00000447099 0.083±0.00 N/A N/A N/A 0.102±0.00 N/A N/A 0.393±0.00 N/A N/A N/A N/A N/A 0.169±0.00
ENSG00000272858 ENST00000607919 0.146±0.00 0.678±0.00 0.238±0.00 0.102±0.06 0.936±0.81 0.472±0.00 0.172±0.03 0.550±0.02 0.096±0.00 0.086±0.00 0.225±0.00 0.540±0.57 0.111±0.01 0.050±0.00
ENSG00000279978 ENST00000623644 0.078±0.00 0.252±0.00 0.184±0.00 0.100±0.04 0.115±0.00 0.147±0.06 0.056±0.02 0.118±0.02 0.045±0.00 0.120±0.01 0.039±0.00 0.136±0.10 0.043±0.02 0.154±0.03
ENSG00000280111 ENST00000623127 N/A 2.077±0.00 0.233±0.00 0.233±0.09 N/A 0.516±0.00 N/A N/A 0.330±0.00 0.760±0.00 N/A 0.371±0.00 N/A N/A

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